Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIKSQKSFSGTSQGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNT-----V----KLLNHFEITTRMTS--YHQF--------TKENKEDNIIQRMLGGEVVALVSDAGMPSISDPGYELVQSALDANIPVIPLPGANAALTALIASGLAPQP-FYFYGFLPRQNKERTQAIEKLAAREETWILYESPHRLKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWAMDEEIRGEFCLIIEGNSNPQLAEEQLWWQELDIKTHVSTVMEQENVSSKDAIKTVMKARNLPKREVYSAYHEIK |
| 2QBU Chain:A ((1-228)) | -----------MHGKLIGVGVGPGDSELLTLRAVNVLRSVPVICAPRSSSERESIALSIVEDILTERRDGCRILDPVFPMTDDRDELESHWDSAARMVAAELEDGRDVAFIT-LGDPSIYSTFSYLQQRIEDMGFKTEMVPGVTSFTACAATAGRTLVEGDEILLVVPRVD----DRFERVLRDVDACVIMKTSRHGRRA-MEVVESDPRGKDVVSVANCSMDDEVVERGFAS---------GGGYLATTLVRF----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QBU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128664 for 1609 contacts (-80.0/contact) +
2D Compatibility (PS) -23019 + (NN) -14532 + (LL) 6600
1D Compatibility (HY) -4800 + (ID) 1650
Total energy: -166065.0 ( -103.21 by residue)
QMean score : 0.455
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