Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTRVMYPAEIKEKAIKMKLAGK--STKEIMRTLNIKNPTQVKTWWRWYRNEETHRFHQGVGKQYKYQKGVPELPEIEQLKIALRQKELELEILKKYKALERK---
2JN6 Chain:A ((1-97))
-MPTKTYSEEFKRDAVALYENSDGASLQQIANDLGI-NRVTLKNWIIKYGSNHNVQGTTP-------SAAVSEAEQIRQLKKENALQRARTRHPAESCLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2JN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6444 for 495 contacts (13.0/contact) +
2D Compatibility (PS) -9400 + (NN) -1076 + (LL) 724
1D Compatibility (HY) 400 + (ID) 900
Total energy: -3808.0 ( -7.69 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_2JN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JN6-query.scw
PDB file :
Tito_Scwrl_2JN6.pdb
: