Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKIIFNADDFGISPGAVYGILESYKRGVVKSTTLLANSPAFDLAVEVAKENPGLDIGAHLTLTFGSPVLQGLETLTDDDGRFRRNYTSLEN--GLADV---DMNEVERELTAQIEKILDAGITISHFDTHHSIEPLIYPVQHKLAEKYGVSIRRHSDVSDFGAIKTPDLFATEFYADGVSFETIKKLVQKHIGTNDVVEVMTHPAFIDETLREISSYVEPRIKEVSILTSRELQAYLGQQEVEIISFRDL-- |
| 2NLY Chain:A ((3-226)) | MKRAAIIIDDFGGDVKGVDDFL---TGEIPVTVAVMPFLEHSTKQAEIAQA-AGLEVIVHMPLEPKPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEVVKEKNAFIIDSGTSPH------SLIPQLAEELEVPYATRSIFLD-----------NTHSSRKEVIKNMRKLAKKAKQGSEPIGIGHVGVRGDETYA----------------GIRSMLDEFQAESIQLVPVSQLLP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2NLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -66470 for 1778 contacts (-37.4/contact) +
2D Compatibility (PS) -22621 + (NN) -11569 + (LL) 2904
1D Compatibility (HY) -6400 + (ID) 1800
Total energy: -105956.0 ( -59.59 by residue)
QMean score : 0.412
|
|
|