Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKK-SKFNGMTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQHVKTQEFNRIRVGVSRPLK---GEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIEVMNKYNQK
3V2I Chain:A ((23-217))
IKLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLYGEEVHLLEPQTYMNRSGQSVVALAHFFKILPNEILVAHDELDLPPGAVKLKLGGGSGGHNGLKDISAHLSSQQYWRLRIGIGHPRDMIP-DVANFVLKPPRKEEQDVIDAAIERALAVMPAVVKGETERAMMQL---
General information:
TITO was launched using:
RESULT:
Template:
3V2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125057 for 1530 contacts (-81.7/contact) +
2D Compatibility (PS) -18980 + (NN) -719 + (LL) -68
1D Compatibility (HY) -11200 + (ID) 3250
Total energy: -159274.0 ( -104.10 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_3V2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V2I-query.scw
PDB file :
Tito_Scwrl_3V2I.pdb
: