Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKIYLNELVFYGYHGVLKEETKLGQTFRVSLILGLSTKKAGISDSVEDTVSYADVYETVKEIVEGKPFKLIEALAEKIASEVLTGYPLLEEVTVKLIKPNPPIPGHYDSVAVEIERKRSDLNG
1DHN Chain:A ((2-121))
QDTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLSEAGRTDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENPPIPGHYDGVGIEIVRENK----
General information:
TITO was launched using:
RESULT:
Template:
1DHN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72653 for 843 contacts (-86.2/contact) +
2D Compatibility (PS) -13149 + (NN) -7993 + (LL) -152
1D Compatibility (HY) -11200 + (ID) 2800
Total energy: -107947.0 ( -128.05 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_1DHN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DHN-query.scw
PDB file :
Tito_Scwrl_1DHN.pdb
: