Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKAFLSIGTNIGERLENLNDALRGLAASNQINITNVSSVYETDAVGYEDQAAFLNIAVEIETDFPPIDLLDFCLALELELGRVRLF-KWGPRLIDIDVLLYDDVKTDTEKLKIPHPYMKERAFVMIPLIEISPEKSNLVENPALLEEQGVRKIKNQVNW
3HT0 Chain:A ((3-134))
---AYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGAMLWPLFEIAPE-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HT0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106418 for 948 contacts (-112.3/contact) +
2D Compatibility (PS) -14025 + (NN) -4077 + (LL) 2208
1D Compatibility (HY) -10000 + (ID) 2750
Total energy: -135062.0 ( -142.47 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_3HT0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HT0-query.scw
PDB file :
Tito_Scwrl_3HT0.pdb
: