Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRIGQGYDVHKLAYDRDLIIGGVKIPYEKGLLGHSDADVLLHAITDAIIGAIGAGDIGHFFPDTDMVFKDADSAELLAEIWQKVEADGFRLGNLDATIIAEKPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK
3ERN Chain:C ((7-162))
-MRIGHGFDVHAFGGEGPIIIGGVRIPYE------SDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIK
General information:
TITO was launched using:
RESULT:
Template:
3ERN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103941 for 1221 contacts (-85.1/contact) +
2D Compatibility (PS) -16625 + (NN) -10506 + (LL) 324
1D Compatibility (HY) -13200 + (ID) 4600
Total energy: -148548.0 ( -121.66 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_3ERN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ERN-query.scw
PDB file :
Tito_Scwrl_3ERN.pdb
: