Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNTLKTSYQKTPYKLGGNGPRNVGVLTEALQNIDDNLES---DIYGNGAVIEDFETKIAKILGKQSA--VFFPSGTMAQQIALRIWADRKENR--RVAYHPLSHLEIHEQ-DGLKELQQITPLLLGTANQLLTIDDIKS-LREPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQG--ISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYK--GIGGIAGAILAGNDDFVQEAKIWKRRYGG------DLISLYPYILSADYYFEKRIGKMAEYFEAAKGLAERFNSCSGVKT-VPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQE-----KSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKEL |
| 1ECX Chain:A ((1-376)) | MRVYFDNN-ATTR-----VDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQP----VEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLE-----VDYASFSAHKFHGPKGV-GITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIR---GSTLQNLLSGYGIYVSTHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ECX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168889 for 2818 contacts (-59.9/contact) +
2D Compatibility (PS) -36867 + (NN) -14147 + (LL) 1624
1D Compatibility (HY) -6000 + (ID) 2750
Total energy: -227029.0 ( -80.56 by residue)
QMean score : 0.400
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