Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------MFNWYKKYREEKRDYKQYKKRIAALPEDYKTAMKAIETYLWNFAKGAGMFEILKNVLEMFENAAADNLELKAVV-GDDLAEFADNLL-----SEFPEETWMDKQRQKLRDSIK------------------------------------------------------------------------------------------ |
| 4E8Y Chain:A ((43-350)) | VVPVPREQLARSRVLVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGAANVARNAVTLGGQAGLLCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGLARFDVLLPQHDVVLMSDYAKGG-----LTHVTTMIEKARAAGKAVLVDPKGDDWARYRGASLITPNRAELREVVGQWKSEDDLRARVANLRAELDIDALLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGAGVPLVDAVVLANRAAGIVVGKLGTATVDYDEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11075 for 553 contacts (20.0/contact) +
2D Compatibility (PS) -10548 + (NN) 2863 + (LL) 476
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: 1166.0 ( 2.11 by residue)
QMean score : 0.297
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