Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LNLKDTVKLANGVEMPRLGFGVWKVQDGDEAVNSVKWAIEAGYISIDTAAAYKNEEGVGQAIKES----GIKREDLFVTTKLWNAEQGYESTLAAFDESLRKLELDYVDLYLIHWPV--------------------KGKFKDTWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDA--EIAPMVNQIELHPQLTQEPLRKFCAENNIVVEAWSPLG----------NGKLLSNPEIKAIADAHGKSVAQVILRWDLQIGVVTIPKSVHQERIIQNADIFDFELTEEEVAKISGLNKDERTGPDPDNFNF |
1ZUA Chain:X ((6-299)) | ------VELSTKAKMPIVGLGTWKSPLG-KVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATILSFNRNWRA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133481 for 2190 contacts (-61.0/contact) +
2D Compatibility (PS) -28123 + (NN) -9194 + (LL) -264
1D Compatibility (HY) -25600 + (ID) 5750
Total energy: -202412.0 ( -92.43 by residue)
QMean score : 0.578
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