Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LNNKTSWIEELKEKRMAYGLSQNKLAVASGITRQYLSDIENEKVIPTEQVKTALLDSLERFNPDNPLEMLFDYVRIRFPTDNVEKIIEEILHLNIDYMIHEDFGYYSYPEHYRFGDIMVMVSYDITKGVLLELKGKGCRQYENFLLAQHRSWYDFFTDCLEVNGVFKRLDLAINDKVGILDIPELARKSEQEECISIFRTFKNYRSGELVHRDEKSDMGNTLYIGSLKSEVYFCIYEKDYEQFIKNDIPLEDPEVKNRFEIRLKNDRATHAIQDLLAYRNAEKTAFEIINRYIRFADKDTTKRRSQWQTSERWEWFIGKNRGELRLTTKPEPYSYERTLNWLRHQVAPTLKVASILDVLNETDIIPAMIRDANLTEKHEKLIEQQNLAVEDVIV |
| 4CWC Chain:A ((6-275)) | ---------------PQPELSFDAMTIVGNLNKTNAKKLSDFMSTEP---------QIRLWDILQ------TKFKAKALQEKVYIEYDKVKADSWD-----------------------------RRNMRVEFNPNKLTHEEMLWLKQN--IIDYMED-----DGFTRLDLAFDFED---DLSDYYAMTDKAVKKTIFYG--------------RNGKPETKYFGVRDSDRFIRIYNKKQERKDNADVE-VMSEHLWRVEIELKRDMVDYWNDCFNDLHILKPDWSSLEKVKDQAMIYMLIHEESTWGK-----------------LERRTKNKYREMLKSI-----------------SEIDLTDLM--KLTLKENEKQLQKQIEFWQR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CWC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20509 for 1935 contacts (-10.6/contact) +
2D Compatibility (PS) -28781 + (NN) -5016 + (LL) 10280
1D Compatibility (HY) -5600 + (ID) 2300
Total energy: -51926.0 ( -26.84 by residue)
QMean score : 0.199
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