Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAE-PEIQAELEQIQQQLFDAGGDLATEEGK---RAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
3CI3 Chain:A ((7-194))
VKIYTKNGDKGQTRIIGKQILYKNDPRVAAYGEVDELNSWVGYTKSLINSHTQVLSNELEEIQQLLFDCGHDLATPADDERHSFKFKQEQPTVWLEEKIDNYTQVVPAVKKFILPGGTQLASALHVARTITRRAERQIVQLMREEQINQDVLIFINRLSDYFFAAARYANYLEQQPDMLYRNSKDVFR----
General information:
TITO was launched using:
RESULT:
Template:
3CI3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61734 for 1376 contacts (-44.9/contact) +
2D Compatibility (PS) -19838 + (NN) -8155 + (LL) 112
1D Compatibility (HY) -15200 + (ID) 4750
Total energy: -109565.0 ( -79.63 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_3CI3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CI3-query.scw
PDB file :
Tito_Scwrl_3CI3.pdb
: