Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNIQAMRKKVEVQI-------ADLQNETDEIAEFNQAKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLEHVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGMRNQGQGSLKDFHIGYSSVPLLENGDVDFPLIAEKMTRKTKMIGIQRSRGYADRPSFTIDKIKEMIIFVKNINPEVIVFVDNCYGEFAEYLEPTEVGADIIAGSLIKNPGGGLAKTGGYIAGK-EALIDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAE---FGVVADPTWDAPRTDLIQSISFHNKEKMVAFA----QAIQAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIQKTL-- |
| 1CS1 Chain:A ((3-386)) | -------RKQATIAVRSGLNDDEQY--GCVVPPIHLSSTYNFTGF--------NEPR-AHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSL-------AKRGCYRVLFVDQGDEQALRAALA-EK----PKLVLVE----SPSNPLLRVVDIAKICHLAREV--GAVSVVDNTFLSPA-LQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIG----VTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140857 for 3236 contacts (-43.5/contact) +
2D Compatibility (PS) -39127 + (NN) -15852 + (LL) 1744
1D Compatibility (HY) -3200 + (ID) 2850
Total energy: -200142.0 ( -61.85 by residue)
QMean score : 0.316
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