Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAVEKITMPKLGESVTEGTISSWLVKPGDTVEKYDAIAEVLTDKVTAEIPSSFSGTIKEILAEEDETLEVGEVICTIETEEASSSEPVVEAEQTEPKTPEKQETKQVKLAEAPASGRFSPAVLRIAGENNIDLSTVEGTGKGGRITRKDLLQVIENGPVAPKREEVKSAPQEKEATPNPVRSAAGDREIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNTVKD-SFKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTW--AGDKIIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVNSTGSFGSVQSMGIINHPQAAILQVESIVKRPVIIDDM-IAVRDMVNLCLSIDHRILDGLLAGKFLQAIKAKVEKISKENTALY |
| 2IHW Chain:D ((31-252)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRTEPVKGFHKAMVKTMSAA-LKIPHFGYCDEVDLTELVKLREELKPIAFAR--GIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IHW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148751 for 1667 contacts (-89.2/contact) +
2D Compatibility (PS) -23946 + (NN) -10983 + (LL) 12788
1D Compatibility (HY) -14000 + (ID) 3900
Total energy: -188792.0 ( -113.25 by residue)
QMean score : 0.432
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