Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKWNVYLTKGEYEPWWFFEEWETSIQEDFSFSDKEAAFLKYQELAEALLSNYPKHQTKKDCLLAAWNEEEVEYCEDCEDDIQTFHGLILFFEGEVYQPTPEEKETIFKRVLTFA
1C1Y Chain:B ((1-77))
SNTIRVFLPNK--------QRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKG----------KKARLDWNTDAASLIGEELQVDFL--------------------
General information:
TITO was launched using:
RESULT:
Template:
1C1Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5060 for 522 contacts (-9.7/contact) +
2D Compatibility (PS) -8211 + (NN) -2488 + (LL) 3620
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -15539.0 ( -29.77 by residue)
QMean score : 0.064
(partial model without unconserved sides chains):
PDB file :
Tito_1C1Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C1Y-query.scw
PDB file :
Tito_Scwrl_1C1Y.pdb
: