Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKRQSNNRRIKQNLVEGSRSQQNTKRKKTNLVLNVLIIVVSLLIIGSLYFVLFKTESDPAQQENKTASSTAKKEDAAKSSEKKKDSSDDKTTETTESDDPNVAKVITKDWKPIGTEQTGDHVNSYSSTSVDWQEKRKAFSVATDIPVSNTSLWFVEQGADPATQAIGTLSTKENPDKAYRVYITWVDGEGWQPTKVEELKTNDKR---- |
| 1EER Chain:A ((1-166)) | APPRLICDSRVLERYLLEAKEAEKITTGCAEHCSLNEKITVPDTKVNFYAW-----KRMEVGQQAVEVWQGLALLSEAVLRGQALLVKSSQPW------------------------EPLQLHVDKAVSGLRSLTTLLRALGAQKEAISN----------SDAASAAPLRTITADTFRKLFRVYSNFLRG------KLKLYTGEACRTGDR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 89595 for 1247 contacts (71.8/contact) +
2D Compatibility (PS) -16754 + (NN) 3151 + (LL) 2432
1D Compatibility (HY) -400 + (ID) 1450
Total energy: 76574.0 ( 61.41 by residue)
QMean score : 0.047
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