Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEELLKRFTKYVKVDTQSNEESTVCPTTPGQMELANILVTELKEI---GMQEVTVD----EFGYVMATLPSNSTKEVPVIGFLAHLDTATDLTGKNVQPQVH--ENYDGKDIILNKDLNVVLSPKQFPELAGYKGKTLITTDGTTLLGADDKAGITEIMVAMNHLINHPEIKHGKIRIAFTPDEEIGR-GPERFDVEA---F-GAKYAYTMDGGPLG----ELEYESFNAASAKITFK--GNSVHPGTAKNKMVNAVKMAMEFDARIPKDEAPE--------------------------------YTE------------------GYEGFYHLISLNG----------DVEQARSYYIIRDFDHLKFVERKTHIASIAKELEEKYGEGSVELKLND-QYYNMREKIEPVKE-IVDIVSAAMRN-LDIEPKISPIRGGTD-GAQLSY----K-GLPTPNIFGGGENFHGKFEYVALESMVKATEVIIEVARLFEEKE |
| 3PFE Chain:A ((18-471)) | --EEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMT-LEIVRLKNRTPLLFMEIPGQ---IDDTVLLYGHLDKQPEM--SGW---SDDLHPWKPV-L----------------------KNGLLYGRG----GADDGYSAYASLTAIRALEQQGL-PYPRCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDSGAGNYEQLWMTTSLRGNLVGKLTVELINEGVHSGSASGIVADSFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADGFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNPP-Y-NAKVDFKIQNGGSKGWN--APLLSDWLAKAASEASMTYYDKPAAYMGEGGTIPFMSMLGEQFPKAQFMITGVLGPH-SNAHGPNEFLHLDMVKKLTSCVSYVLYSFSQK- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -49051 for 2952 contacts (-16.6/contact) +
2D Compatibility (PS) -39536 + (NN) -19617 + (LL) 2380
1D Compatibility (HY) -10400 + (ID) 2900
Total energy: -119124.0 ( -40.35 by residue)
QMean score : 0.454
|
|
|