Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNELGAIMAKAVTPEPRLGNPTPRVAETASGMLNAIGLQNPGLEHVLAHELPFLEQFETPIIANVAGATEDDYVQVCARIGESK--AVKAIELNISCPNVKHGGIAFGTDPEVAHRLTKAVKNVASVPVYVKLSPNVA--DIVSIAQAIEA-AGADGLTMINTLL-GMRIDLKTRKPIIA--NGTGGLSGPAIKPVAIRMIHQVRAVS-NIPIIGMGGVQTVDDVLEFLIAGADAVAVGTMNFT-DPFICPKLISELPKRMDALGISSLQDLKKERTNQ |
| 2E6F Chain:A ((2-312)) | -MCLKLNLLDHVFANPFMNAAGVLCSTEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHDYSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGK-PQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQEEGPGIFTRLEDELLEIMARKGYRTLEEFRGRVKT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E6F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165840 for 2694 contacts (-61.6/contact) +
2D Compatibility (PS) -32013 + (NN) -13477 + (LL) 156
1D Compatibility (HY) -16400 + (ID) 3950
Total energy: -231524.0 ( -85.94 by residue)
QMean score : 0.473
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