Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKRILMLEDGNYFIGDAIGSEKETIGEVVFNTGMTGYQETITDPSYYGQIITFTYPLVGNYGVNRDDFESINPAVKGVVVREAAEFASNWRNQITLNEFLKEKGIPGIAGIDTRKLTKLIRKEGTLKGILAAETADKEELLHHLRSVRLPVDQVHEVSSAKAFASPGDGKRVVLVDYGV--KSSILRELNKRNCYVTVVPYNTSAEEILAMHPDGVMLSNGPGDPKDV-PEALEMIRGIQ-GKLPLFGICLGHQLFALANGADTFKLKFGHRGANHPVKELAT-------GRVDFTAQNHGYAVEKDSLIGTDLKVTHIELNDETVEGLAHKEYPAYTVQYHPEANPGPSDVNYLFDEFMEMMNGKEEGELHA |
| 2A9V Chain:A ((12-207)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMLKIYVVDNGGQWTHREWRVLRELGVDTKIVPNDIDSSEL--DGLDGLVLSGGAPNIDEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAKHPEFGK-TKVSVMHSENIFGGLPSEITVWENHNDEII--NLPD-DFTLAASSA-TCQVQGFYHKTRPIYATQFHPEVEHTQ-YGRDIFRNFIGICASYREIQK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A9V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66110 for 1549 contacts (-42.7/contact) +
2D Compatibility (PS) -20353 + (NN) -10570 + (LL) 11080
1D Compatibility (HY) -7200 + (ID) 2250
Total energy: -95403.0 ( -61.59 by residue)
QMean score : 0.465
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