Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTIAKMIDHTALKPDTTKEQILTLTKEAREYGFASVCVNPTWVKLSAEQLAGAESVVCTVIGFPLGANTPEVKAFEVKDAIQNGAKEVDMVINIGALKDKDDELVERDIRAVVDVAKGKALVKVIIETCLLTD----EEKVRACEIAVKAGTDFVKTSTGFST-GGATAEDIALMRKTVGPNIGVKASGGVRTKEDVEKMIEAGATRIGASAGVAIVSGEKPAKPDNY
3NDO Chain:A ((11-230))AQVAALVDHTLLKPEATPSDVTALVDEAADLGVFAVCVSPPLVSVAAGVAP-SGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAA-TLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFHPSGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAGATRLGLSGSRAVLDGFGS------


General information:
TITO was launched using:
RESULT:

Template: 3NDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -106630 for 1959 contacts (-54.4/contact) +
2D Compatibility (PS) -24085 + (NN) -16145 + (LL) -24
1D Compatibility (HY) -11600 + (ID) 4400
Total energy: -162884.0 ( -83.15 by residue)
QMean score : 0.627

(partial model without unconserved sides chains):
PDB file : Tito_3NDO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NDO-query.scw
PDB file : Tito_Scwrl_3NDO.pdb: