Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------MRKEWKKITAIVLLII------------IIAGFFIPVPYYISKPGGTEELA-------PLVTVD---------------------NHPNKKDGSLSLVTIAMG-------KANIYTYMTAKFLP-YHELEK---------DSEIKYENESDEEYNVRQMQMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAADV------------------LHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYK--HGDKNEQADIKLTAIDKKGTPGIGITLVDDEKITADPTVKIDSEKIGGPSAGLMFSLEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGIDQKVVAADKSGAKIFFAPNDPITEEMKKSDPSIESNYDTAVKTAKDIDTNMKIVPVKTFQDAVDYLKKLQ |
| 3M6A Chain:A ((7-531)) | TGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAVQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGGRIIQGMKKAGKLNPVFLLDEIDKMSAMLEVLDPEQNSSFSDHYIEETFDLSKVLFIATANNLATIPGPLRDRMEIINIAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVS--REVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAP-----KDNEKDIEDIP----------ESVREGLTFILASHLDEVLEHA--LV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M6A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44474 for 2425 contacts (-18.3/contact) +
2D Compatibility (PS) -34892 + (NN) -10603 + (LL) 396
1D Compatibility (HY) -7600 + (ID) 2900
Total energy: -100073.0 ( -41.27 by residue)
QMean score : 0.187
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