Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKKPLFTIEERMEMIRQVTAHLPNVQVESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQIASMNRTLNADIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNKAVQAKFK
3L93 Chain:A ((8-161))
-----AIYPGTFDPITNGHLDLVTRASAMFSHVILAIADSSSKKPMFTLDERVALAKKVTAPLKNVEVLGFSELMAEFAKKHNANILVRGLRSVSDFEYEWQLANMNRHLMPKLESVFLIPSEKWSFISSSLVKEVARHGGDITPFLPKPVTKALLAKL-
General information:
TITO was launched using:
RESULT:
Template:
3L93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99464 for 1194 contacts (-83.3/contact) +
2D Compatibility (PS) -16687 + (NN) -7238 + (LL) 292
1D Compatibility (HY) -18000 + (ID) 3850
Total energy: -144947.0 ( -121.40 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_3L93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L93-query.scw
PDB file :
Tito_Scwrl_3L93.pdb
: