Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQKLIYFLSQTHIRSAIAEAWAKRLSLSNVKFISGSWHKSKSTPFIAEALNEFAIEPPESLSYSPSSELLADADLIVTIYDSAHETAPKFPANIQEKIIYWDIDDPEQEI-ALPQKWASYQEVCDNIALSVKNLEHVLIEA
1JL3 Chain:A ((3-139))
-NKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPHV--KREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETGK--
General information:
TITO was launched using:
RESULT:
Template:
1JL3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72939 for 1089 contacts (-67.0/contact) +
2D Compatibility (PS) -15025 + (NN) -9490 + (LL) 680
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -105024.0 ( -96.44 by residue)
QMean score : 0.636
(partial model without unconserved sides chains):
PDB file :
Tito_1JL3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JL3-query.scw
PDB file :
Tito_Scwrl_1JL3.pdb
: