Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIVLVCAAGMSTSLLVTKMRKAAEERGETCEIEAYSI-AEVSNLIDDADVVLLGPQVRYQKKTVDELAAGKIPVDVIDMAAYGTMNGEKVLGQALDLINGFQK
1DXY Chain:? ((1-100))
MKIIAYGARVDE-----IQYFKQWAKDTGNTLEYHTEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRNVGTDNIDMTAMKQYGIRLSNVPAY
General information:
TITO was launched using:
RESULT:
Template:
1DXY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49135 for 714 contacts (-68.8/contact) +
2D Compatibility (PS) -10437 + (NN) 852 + (LL) 348
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -60272.0 ( -84.41 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_1DXY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DXY-query.scw
PDB file :
Tito_Scwrl_1DXY.pdb
: