Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVLVIGANGKIGRLLVEKLAMEKGFFVRAMVRKAEQVS------EL---EKLGAKPIIADLKK--DFHYAYDEIEAVIFTAGSGGHTPASETVNIDQNGAIKAIETAKEKG-VRRFIIVSSYGADNPENG-PESLAHYLKAKQAADEELKKSGLDYTIVRPVGLSDDPATG------------KIA-EVS-GKPKTNIPRADVADFISEALSEKSSFYKTYTI-ESG-DTPIKQFFN |
| 1QYC Chain:A ((5-229)) | SRILLIGATGYIGRHVAKASLDL-GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVISTVGSLQ-----------IESQVNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79987 for 1487 contacts (-53.8/contact) +
2D Compatibility (PS) -22225 + (NN) -14830 + (LL) 724
1D Compatibility (HY) -8800 + (ID) 2150
Total energy: -127268.0 ( -85.59 by residue)
QMean score : 0.507
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