Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRGLLLVSVLMLFIFLTVACGSSEDNEESGEISTKEIELTVDDPIIPTDENGEATIEGTVDPK-SKLTIDGKAVK--KDDSGRFTYTYSLTNDNVAEVDVKLLAVRKNYKDEKYTITITNNSKAYNDNMVKQEAIQKEEAEKAEKERKEAEEKAKQEEEAAAAKAATTDENTPSDDTVYGTLASKDTLTKEGDAFYKDEALDVLYSTVENDEIFQVLIQLGDESTIRKDLDKNHLTELARDYMESDATLIQTVSDESFVYESPSINKTYTVDYMLNDEGYVIAVYVTQAK |
| 1ULV Chain:A ((708-771)) | -----------------------------------------------------ATAVVRGTTNAAKVYVSVNGTATEAPV-TDGTFSLDVALTG-AKNKVT--VAAVAADGGTAVEDRTVL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ULV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9768 for 366 contacts (-26.7/contact) +
2D Compatibility (PS) -6771 + (NN) -1587 + (LL) 16104
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -4272.0 ( -11.67 by residue)
QMean score : 0.621
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