Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRAAVLYEN-NVIKAEQIDEATCGKDQVRVEVKAVGICGSDIHKMQTRWK----YPLPAVMGHEFAGVITEIGSEVTNVAMGDRVAGIPLEPCMECNYCKAGDFALCDNYRMVGSHFHGGFAENVVMKADNVISI-GDLDFEEGAMIEPLAVSMHGVLGIQPRLGDTVIVFGIGTIGILVVQCLLLAGVKDIIAVDISDKKLADAREFGCKYTINPKNEDLKERVFAYTNGLGADIALECAGSKITQEQCLLVTKKKGKVGFLGIAYADVLLHEEAF-ENIFRRELTLKGFWNSYSAPFPGEEWRTSIEFVKQGRIKLKPLISHRYKLEETKEAFDMILSREHDYNKVMILPQKGDD |
| 2DQ4 Chain:A ((1-342)) | MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPGGEARIL-GIPSDP--IRFDLAGELVMRGITAFGIAGR--R--LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQ--AVKVILDPK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240971 for 2975 contacts (-81.0/contact) +
2D Compatibility (PS) -35408 + (NN) -6510 + (LL) -308
1D Compatibility (HY) -14400 + (ID) 5050
Total energy: -302647.0 ( -101.73 by residue)
QMean score : 0.427
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