Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VRHVVIFCASILNRFFASVECVKRRLNPLEAYLVVMSNAERAGGLVLAATPKMKQEHHIKTGSRMYELPTWDKRIIIAPPRMKLYLKVNAMI-QAIFRRYVPAEFIHVYSIDECFLDVTGSHLLFGSTEEIVRKIQRDILEELRLYVTVGIGDNPLLAKLALD-NVAKNRDDGIAEWRYEHVPETIWKIRHLDDVCGIGRRTAVRLQKMGIFNMYQLSQTPPQVLKN-VMGVVGEQLYYHAHGIDYSLLNEKYVPVSKSYGKSQI-LEKDYHVPAEVEIVIREMVEEVAMRLRQNHVDTAVIHLSVGYSKYSIKKGFSHQAKIPPTSSSHALIPYFLQLFRRYDER--EPVRSIAISCGKITLKTGLQLNLFEDFTQTLNHEQLEITVDKIRSRYGFKSLMHASSLLNGATGLKRSEMVGGHKG |
| 1JX4 Chain:A ((2-341)) | -----IVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMN-LLREYSEK--IEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMA----KPNGIKVIDDEEVKRLIRELD-IADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR---VRKSIGRIVTMKRNSRN-LEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVT-----EDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259804 for 2616 contacts (-99.3/contact) +
2D Compatibility (PS) -35524 + (NN) -9390 + (LL) 5644
1D Compatibility (HY) -14000 + (ID) 3750
Total energy: -316824.0 ( -121.11 by residue)
QMean score : 0.484
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