Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------MANLSELPNIGKVLEQDLIKAGIKT---PAELKDVGSKEAFL--------RIWENDSSV---CLSEL----CALEGAVQGIRWHDLDEAKK-SELKKFHQSL---------------------------------------------------------------------------------------------------------------------- |
4FDW Chain:A ((21-401)) | ASLEDFSIEQLPAKTIYALGENIDLTGLNVTGKYDDGKQRPVKVTSEQISGFSSSVPVDKQEVTITIEGKQKSFSVHISPVRVENGVLTEILKGYNEIILPNSVKSIPKDAFRNSQIAKVVLNEGLKSIGDMAFFNSTVQEIVFPSTLEQLKEDIFYYCYNLKKADLSKTK-ITKLPASTFVYAGIEEVLLPVTLKEIGS-QAFLKTSQLKTIEIPENVSTIGQEAFRESGITTVKLPNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPESIRILGQGLLGGNRKVTQLTIPANVTQINFSAFNNTGIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVEKYKNANGWRDFTNKITTF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4FDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -28684 for 479 contacts (-59.9/contact) +
2D Compatibility (PS) -8007 + (NN) 3442 + (LL) -16
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -40115.0 ( -83.75 by residue)
QMean score : 0.193
|
|
|