Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------------------------------------------------------------------------------------------------------------------------------------------MANLSELPNIGKVLEQDLIKAGIKT---PAELKDVGSKEAFL--------RIWENDSSV---CLSEL----CALEGAVQGIRWHDLDEAKK-SELKKFHQSL----------------------------------------------------------------------------------------------------------------------
4FDW Chain:A ((21-401))ASLEDFSIEQLPAKTIYALGENIDLTGLNVTGKYDDGKQRPVKVTSEQISGFSSSVPVDKQEVTITIEGKQKSFSVHISPVRVENGVLTEILKGYNEIILPNSVKSIPKDAFRNSQIAKVVLNEGLKSIGDMAFFNSTVQEIVFPSTLEQLKEDIFYYCYNLKKADLSKTK-ITKLPASTFVYAGIEEVLLPVTLKEIGS-QAFLKTSQLKTIEIPENVSTIGQEAFRESGITTVKLPNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPESIRILGQGLLGGNRKVTQLTIPANVTQINFSAFNNTGIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVEKYKNANGWRDFTNKITTF


General information:
TITO was launched using:
RESULT:

Template: 4FDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28684 for 479 contacts (-59.9/contact) +
2D Compatibility (PS) -8007 + (NN) 3442 + (LL) -16
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -40115.0 ( -83.75 by residue)
QMean score : 0.193

(partial model without unconserved sides chains):
PDB file : Tito_4FDW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FDW-query.scw
PDB file : Tito_Scwrl_4FDW.pdb: