Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIEF-DEAFNENLKGVSRIDSLLLILRKDGRENDFTEEQIEALAADKNDFYVSLLKEITPADVLPGIKELIVDLKKQNLKCAIASVSKNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACRGLGLETSEVVGIEDAQAGIEAINAAGIVSVGVGS--GLRDADMTVKSTGLLDLRILEILHSK
2WF7 Chain:A ((1-216))
---MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKK--VSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVW--
General information:
TITO was launched using:
RESULT:
Template:
2WF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139568 for 1800 contacts (-77.5/contact) +
2D Compatibility (PS) -23225 + (NN) -11897 + (LL) 192
1D Compatibility (HY) -18800 + (ID) 4900
Total energy: -198198.0 ( -110.11 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_2WF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WF7-query.scw
PDB file :
Tito_Scwrl_2WF7.pdb
: