Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVLEIKNLHVSIEDKEILKGLNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTAGEILFDGEDILELEVDERARLGLFLAMQYPSEVPGITNAEFIRAAMNAGKADDDKISIRQFITKLDEKMELLGMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKVVSKGVNEMR-GEGFGAMIITHYQRLLNYITPDKVHVMMDGKVVLSGGPELAVRLEKEGYAQIAEELGLEYKEEV
2YYZ Chain:A ((2-222))-PSIRVVNLKKYFGKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAG--IYKPTSGEIYFDDVLVNDIPPK---YREVGMVFQNYALYPHMTVFENIAFPLRARRIS-----KDEVEKRVVEIARKLLIDN-LL-DRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTHDQAEAM-TMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFIGNPPTNFLRD


General information:
TITO was launched using:
RESULT:

Template: 2YYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114164 for 1744 contacts (-65.5/contact) +
2D Compatibility (PS) -23417 + (NN) -5689 + (LL) 724
1D Compatibility (HY) -8400 + (ID) 2600
Total energy: -153546.0 ( -88.04 by residue)
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_2YYZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YYZ-query.scw
PDB file : Tito_Scwrl_2YYZ.pdb: