Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIFEKAPAKL-NLGLDIKGRCDDGYHELAMIMVSID-LNDYVTISELKEDCIVIDSDSSKMPLN-NDNDVFKAADIIKNQYGINKGVHIRLEKSIPVCAGLGGGSTDAAATIRALNRLWNLQMDYDEMVAIGFKIGSDV---------PYCLGGGCSLVLGKGE-----IVKPLPTLRPCWIVLVKPDFGISTKSIFRDID--------CKSISRVDIDLLKSAILSSDYQLMVKSMG--NSLEDITITKNP---VISTIKERMLNSGAD--VALMTGSGPTVFSMCSTEKKADRVFNSMKGFCKEVYKVRLLR-------------- |
1H72 Chain:C ((1-296)) | MKVRVKAPCTSANLGVGFD-----------VFGLCLKEPYDVIEVEAIDDKEIIIEVDDKNIPTDPDKNVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNY--EPLEVLHIPI--DFKLDILIAIPNISINTKEAREI--LPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGK---LIPNYFKIKEEVKDK---VYGITISGSGPSIIAFPK-EEFIDEVENILRDYYE---------NTIRTEVGKGVEVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165249 for 2071 contacts (-79.8/contact) +
2D Compatibility (PS) -26984 + (NN) -6611 + (LL) 1180
1D Compatibility (HY) -10000 + (ID) 2800
Total energy: -210464.0 ( -101.62 by residue)
QMean score : 0.521
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