Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLKDKNIFITGSSRGIGLAIAHQFAQLGANIVLNGRSEISEDLIAEFADYGVKVIAIS-GDVSSFEDANRMIKEAIASLGSVDVLVNNAGITNDKLMLKMTVEDFESVLKINLTGAFNMTQSVLKPMTKARQGAIINISSVVGLTGNVGQANYAASKAGLIGFTKSVAREVAARGIRVNAIAPGFIESDMTDVIPEKMQEAILAQIPMKRIGKGKEVAQVASFLAEQE--YLTGQVIAIDGGMTMQ
1Q7B Chain:B ((2-243))
-NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIR---AEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR--SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYMV
General information:
TITO was launched using:
RESULT:
Template:
1Q7B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108509 for 2010 contacts (-54.0/contact) +
2D Compatibility (PS) -25496 + (NN) -4263 + (LL) 1056
1D Compatibility (HY) -17600 + (ID) 5500
Total energy: -160312.0 ( -79.76 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_1Q7B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q7B-query.scw
PDB file :
Tito_Scwrl_1Q7B.pdb
: