Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKETLILLYGGRSAEREVSVLSAESVMRAINYDKFFVKTYFITQVGQFIKTQEFDEMPSSD--EKLMTNQTVDLDK-----MVRPSDIYDDNAI--VFPVLHGPMGEDGSIQGFLEVLRMPYVGTNILSSSVAMDKITTKQVLATVGVPQVAYQTYFEGDDLEHAIKLSLETLSFPIFVKPANMGSSVGISKATDESSLRSAIDLALKYDSRILIEQGVTAREIEVGILGNNDVKTTFPGEVVKDVDFYDYDAKYIDNKI---------TMDIPAKVDEATMEAMRQYASKAFKAIGACGLSRCDFFLTKDGQIFLNELNTMPGFTQWSMYPLLWENMGLTYSDLIEKLVMLAKEMFEKRESHLI |
| 1E4E Chain:B ((2-340)) | -NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITKSGVW----KMCEKPCAEWENENCYSAVLSPDKKMHGLLVKKNHEYEINHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQSSAICMDKSLTYIVAKNAGIATPAFWVINKDDRPVAA------TFTYPVFVKPARSGSSFGVKKVNSADELDYAIESARQYDSKILIEQAVSGCEVGCAVLGNSAALVV--GEV--DQIRLQYGIFRIHQEVEPEKGSENAVITVPADLSAEERGRIQETVKKIYKTLGCRGLARVDMFLQDRGRIVLNEVNTLPGFTSYSRYPRMMAAAGISLPELIDRLIVLAL----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165527 for 2713 contacts (-61.0/contact) +
2D Compatibility (PS) -35279 + (NN) -14197 + (LL) 2664
1D Compatibility (HY) -20400 + (ID) 5850
Total energy: -238589.0 ( -87.94 by residue)
QMean score : 0.444
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