Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQSYINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTDNFAELVCSNSFRGDSLTNAVGLLKEEMRRL-DSIIMRNGEAH-RV---P-AG-GAMAVDREGYSEAVTEEIHKHPLIEVIRD---------------------EITDIPGDAITVIATGPLTSDSLAAKIHELNGGDGFYFYDAAAPIVDKNTIDMNKVYLKSRYDKGEAAYLNCPMTKEEFMAFHEALTTAEEAPLNSFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPEDYKGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLDQTFATRKNPNLFFAGQMTGVEGYVESAASGLVAGINAARRFNGESEVVFPQTTAIGALPHYITHTDSKHFQPMNVNFGIIKELEGPRIRDKKERYEAIATRALKDLEKFLNY |
| 2QA2 Chain:A ((11-166)) | -SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGE-----SRGLGFTARTMEVF---DQRGILP-AFGPVETSTQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGR-GAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLT-TRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCEITPRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQDISHGEPVWVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERHPVGRRLLMNTQAQGMLFLSGDEMQPLRDVLSELIRYDEVSRHLAGMVSGLDIRYEVDGGDHPLLGMRMPHQELVRAHGKTSTTELLHPARGVLLDIADDAEVREAATGWSDRVDIVTASLHDAPPQGPLSDARAVLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32472 for 872 contacts (-37.2/contact) +
2D Compatibility (PS) -13233 + (NN) 1218 + (LL) 404
1D Compatibility (HY) -800 + (ID) 1200
Total energy: -46083.0 ( -52.85 by residue)
QMean score : 0.459
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