Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPFVKIDLFEGRSQEQKNELAREVTEVVSRIAKAPKENIHVFINDMPEGTYYPQGELKKK
1BJP Chain:C ((1-58))
-PIAQIHILEGRSDEQKETLIREVSEAISRSLDAPLTSVRVIITEMAKGHFGIGGELAS-
General information:
TITO was launched using:
RESULT:
Template:
1BJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10147 for 314 contacts (-32.3/contact) +
2D Compatibility (PS) -6566 + (NN) -5885 + (LL) 272
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -27576.0 ( -87.82 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_1BJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BJP-query.scw
PDB file :
Tito_Scwrl_1BJP.pdb
: