Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYLKSLSIKNYRKYGEEVQTINFAHSKWSEMSGAEDESEKINRTEEYISKSSSLIV----GKNNSGKSTIVKLLNTLQNTKSGSRNIFKYTDFNLKMLSDWYRFNIDNKSKEDIESIDKSDFPKLEFQLILGIDDENDLISSFEDILILGGIETVGTHENQEVAEVTIDVKYEVADVQSFLEELVKIKSSPREKIEQYDQGYQKELR----YRKFLSLFSSNYFVLNFYPIRRDEPAKEFSLSSLLKVATIEANTVKNDKTLSQAYNKIVSTYIKNNDIVEIDSLVGDINYQVKDMVDTNIKDILQSAVSSIESTKNLKMNLHPDVTLEKIFANSIIYEYQEGNNNIPESQFGMGYTNLMVIIAKIVDYIELYSEKDINGSVNILCIEEPESFMHPQMQELFIKNISKAIATLLGKKQQLDTFQIIITTHSTHILNSKIQSGNTLNNISYLGQVGVNNIIKNVSDDKIASGRDIDKKAYEYIKKYLRLEITDIFFADAVVLVEGVSEETYLRYEIDRHSILKNHHVKVYRIDGAYAHQFISLLDLLGVRTVIFTDLDLKRSESEKKVDIKDNAEPDVIPSNIPDLEEKYGGVASSLTTNGTIQYFVKKLLNDDKAKYDKINSKIIEILTDKEELVVEYNNISMYSQGKINKYYATSFEEAIVLTNAGNEDENKYKKSLIKALQYVHPNMRYFG-DIDETSEIADKSY-MYQVKLSDGKSKFSTGIVYLSITDKEFSLKRPQYVESGLNLLCGYFEE |
| 4XDN Chain:A ((24-640)) | --GDKLSISQVYHLAQEYR--DHAYSIANKIGSEEGLKQYYGLMNMSIQMFQLLKTKCTLSVLEDSKVTFEMVELLIQETYN-----FDLAELYISSLKERLQTH---QSDTDL----VEEIMRCEFLLL------HDLPLMRDSKFHYKIALRNCNELVQYMVNLQDELYQNWASVFQYVGVMLCIKLKQHRRVKTSFHGLLSQCREKSQWKWFLNLCYVNYLLNERFPI---------PEDALQELRSTELHTVGPELYAWKLALEMVIQLCKDGNI-------TDHLNEFKNFFDTNKQSLVTN------EGKGCVIKIMPRIALKV--ELPMIFHYKELKNILLLLQSVSYIVN---------------------------CYDEKGNFSRKFLPKVY-STTQKLIKNIAAGGV------------SMNELDSRIQTYKSILEFCEFYKVWEQTLLKGAVVLGPSPG----------YVRLLQAMKVQFEGGGAVEEYTRLAQSGGTSSEVKMISLLNCYTVQAARVSRCSGDK-----------------------------------------------------QGELVEQCNKVWLQVEKLLQETDLQFNPIWECTVTILWLFSHFE-PFSWNPLPCSDKQRAEYVSKLREFYSSNK--FVNRFKLKKALLLQILVNYLGGRMLEHDLGEIYAISAKCFDMCRQQGGMRKVQYVIGIWHLMNCTVAMRGKDVALTNAKLEALVKQITS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 44993 for 4612 contacts (9.8/contact) +
2D Compatibility (PS) -60602 + (NN) 4812 + (LL) 11160
1D Compatibility (HY) -27600 + (ID) 5250
Total energy: -32487.0 ( -7.04 by residue)
QMean score : 0.170
|
|
|