Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQVEVDLPNHSYHIKIEEGCFSEAGDWVSHLWQKQMITIITDSNVEILYGESLVNQLKKQGFTVHVFSFAAGEASKTLEVANRIYGFLAKHHMTRSDGIIALGGGVVGDLAAFVASTYMRGIHFLQIPTSLTAQVDSSIGGKTGVNTSFAKNMVGTFAQPDGVLIDPVTLKTLGNRELVEGMGEVIKYGLIDDIKLWHILEEMDGTI-DSILDSALAIIYHSCQVKRKHVLADQYDKGLRMHLNFGHTIGHAIEVHAGYGEIMHGEAVAIGMIQLSRVAERKNLMPRGISQDIYNMCLKFGLPVHYAE-WDKDVLFDILSHDKKASGQFIKIVILPQLGSATV-HQIPLEEMRDYLEK
3OKF Chain:A ((36-385))-----NLGERSYPISIGAGLFAN-PALLSL-SAKQKVVIVTNHTVAPLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVIALGGGVIGDLVGFAAACYQRGVDFIQIPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPKAVVIDTDCLTTLPAREFAAGMAEVIKYGIIYDSAFFDWLEAQMEALYALDEQALTYAIARCCQIKAEVVAQDEK--GIRALLNLGHTFGHAIEAHMGYGNWLHGEAVSAGTVMAAKTAQLQGLIDASQFERILAILKKAHLPVRTPENMTFADFMQHMMRDKKVLAGELRLVLPTSIGTSAVVKGVPEAVIAQAIEY


General information:
TITO was launched using:
RESULT:

Template: 3OKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -244027 for 2932 contacts (-83.2/contact) +
2D Compatibility (PS) -36694 + (NN) -11028 + (LL) 1124
1D Compatibility (HY) -26000 + (ID) 6550
Total energy: -323175.0 ( -110.22 by residue)
QMean score : 0.491

(partial model without unconserved sides chains):
PDB file : Tito_3OKF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OKF-query.scw
PDB file : Tito_Scwrl_3OKF.pdb: