Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKDLLQLVVKAADEKRAEDIVILDLQPVTSVADYFVIMSASNSRQLEAIADNIREQVKGNGGDASHLEGDSKAGWVLLDLNS---VVVHIFSEDERQHYNLEKLWHEAPLLDAEDFMTE
3V69 Chain:A ((2-117))
ASLKRFQTLV--PLDHKQGTLFEIIGEPKLPK---WFHVECLEDPKRLYVEPRLLEIMFGKDGEHIPHLESMLHTLIHVNVWGPERRAEIWIFGPPPFRRDVDRMLTDLAHYCRMKLMEIE
General information:
TITO was launched using:
RESULT:
Template:
3V69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18155 for 779 contacts (-23.3/contact) +
2D Compatibility (PS) -11790 + (NN) -206 + (LL) 516
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -34085.0 ( -43.75 by residue)
QMean score : 0.323
(partial model without unconserved sides chains):
PDB file :
Tito_3V69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V69-query.scw
PDB file :
Tito_Scwrl_3V69.pdb
: