Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MKEILVLGAGYAGLKAVRNLQKQSGDFHITLVDMNDYHYEATELHEVAAGSQPKEKITFPIKDVIN--TNKVNFMQDEVLKVDAENKTVTVK--------------------NNGELHYDYVVVALGFVSETFGIKGAMENALQMTNISQAENIHNHIVNTMKLYR-----ETKDENLLKLLVCGAGFTGIELAGAMVDE-RPKYAALAGVKPEQIEIICVEAATRILPMFDDELAQYGVNLIKDLGINLMLGSMIKEIKPGEVVYGTSKED--EELKSITAGTIIWTTGVSGSPVMGE-----SGFDQRRGRVMVNSDLRDPKYDNVYVIGDVSAFMDTESGRPFPTTAQIATRMGAHVAKNLLHQIKGEATED------------FSYSPQGTVASVGNTHGLGVVGKTKIKKYPAS-VMKKIIMNKSLVDMGGLKELLAKGRFDLYH------------ |
| 4G9K Chain:A ((1-471)) | MKVIDPQHSDKPNVLILGSGWGAISFLKHID--TKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAF-------AGLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKIDLLFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDFFKGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232621 for 3309 contacts (-70.3/contact) +
2D Compatibility (PS) -42453 + (NN) -17578 + (LL) 404
1D Compatibility (HY) -23200 + (ID) 4550
Total energy: -319998.0 ( -96.71 by residue)
QMean score : 0.482
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