Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKQGDTLSAIASQYRTTTNDITETNEIPNPDSLVVGQTIVIPIAGQFYDVKRGDTLTSIARQFNTTAAELARVNRIQLNTVLQIGFRLYIPPAPKRDIESNAYLEPRGNQVSENLQQAAREASPYLTYLGAFSFQAQRNGT------------------------------LV-APP--L-----------------TNLRS--ITESQNTTLMMIITNLENQAFSDELGRILLNDETVKRRLLNEIVENARRYGFRDIHFDFEYLRP----------QDREAYNQFLREARDLFHRE------GLEISTALAPKTSATQQGRWYEAHDYRAHGEIVDFVVLMTYEWGYSGG-PPQAVSPIGP----------------VRDVIEYAL-TEMPANKIVMGQNLYGYDWTLPYTAGG--------------TPARAVSPQQAIV-IADQNNASIQYDQTAQAPFFRYTDAENRRHEVWFEDARSIQAKFNLIKELNLRGISYWKLGLSFPQNWLLLSDQFNVVKKTFR |
| 1ITX Chain:A ((8-416)) | ----------------------------------------------------------------------------------------------AADSYKIVGYYPSWAAY-GRN-YNVADIDPTKVTHINYAFADICWNGIHGNPDPSGPNPVTWTCQNEKSQTINVPNGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLKQTNPNLKTIISVGGWTW----SNRFSDVAATAATREVFANSAVDFLRKYNFDGVDLDWEYPVSGGLDGNSKRPEDKQNYTLLLSKIREKLDAAGAVDGKKYLLTIASGASAT------YAANTELAKIAAIVDWINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDAGVPAAKLVLGVPFYGRGWDGCAQAGNGQYQTCTGGSSVGTWEAGSFDFYDLEANYINKNGYTRYWNDTAKVPYLYNAS---NKRFISYDDAESVGYKTAYIKSKGLGGAMFWELSGDRNK--TLQNKLK-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ITX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -151430 for 2616 contacts (-57.9/contact) +
2D Compatibility (PS) -32797 + (NN) -12406 + (LL) 8680
1D Compatibility (HY) -8000 + (ID) 2900
Total energy: -198853.0 ( -76.01 by residue)
QMean score : 0.405
|
|
|