Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEREGRVDSLLDTLYNLSEEKEAFFITQKMKKLFSVKLSKSKVILVAACLLLAGSGTAYAAHELTKQSVSVSINGKKKHIRTHANTVGDLLETLDIKTRDEDKITPAKQTKITADMDVVYEAAKPVKLTINGEEKTLWSTAKTVGALLDEQDVDVKEQDQIDPAIDTDISKDMKINIEPAFQVTVNDAGKQKKIWTTSTTVADFLKQQKMNIKDEDKIKPALDAKLTKGKADITITRIEKVTDVVEEKIAFDVKKQEDASLEKGKEKVVQKGKEGKLKKHFEVVKENGKEVSRELVKEETAEQSKDKVIAVGTKQSSPKFETVSASGDSKTVVSRSNESTGKVMTVSSTAYTASCSGCSGHTATGVNLKNNPNAKVIAVDPNVIPLGSKVHVE-GYGY--AIAADTGSAIKGNKIDVFFPEKSSAYRWGNKTVKIKILN |
| 5E27 Chain:A ((137-362)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAATAPIVEG-MQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGT---EVPPVIDGSIWDAIAGCEAGGNWAINTGNGYYGGVQFDQGTWEANGGLRYAPRADL-ATREEQIAVAEVTRLRQGWGAWPVCAARAGAR------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 5E27.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 47978 for 1540 contacts (31.2/contact) +
2D Compatibility (PS) -22760 + (NN) 5621 + (LL) 15560
1D Compatibility (HY) -2400 + (ID) 2500
Total energy: 41499.0 ( 26.95 by residue)
QMean score : 0.207
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