Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKDIATPIRTKEILKKYGFSFKKSLGQNFLIDTNILNRIVDHAEVTEKTGVIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTLSPYENVTVIHQDVLKADVKSVIEEQFQDCDEIMVVANLPYYVTTPIIMKLLEEHLPLKGIVVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMIVPKTVFVPQPNVDSAVIRLILRDGPAVDVENESFFFQLIKASFAQRRKTLLNNLVNNLPEGKAQKSTIEQVLEET-----NID--GKRRGESLSIEEFAALSNGLYKALF
3GRU Chain:A ((30-290))---------------------------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNK--------LDFNKVVANLPYQISSPITFKLIKR--GFDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGKY-HIENENFFDDFLRAIFQHRNKSVRKALIDSSKELNYNKDEMKKILEDFLNTNSEIKNLINEKVFKLSVKDIVNLSNEFYRFLQ


General information:
TITO was launched using:
RESULT:

Template: 3GRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178844 for 2067 contacts (-86.5/contact) +
2D Compatibility (PS) -27120 + (NN) -9402 + (LL) 2980
1D Compatibility (HY) -20400 + (ID) 4900
Total energy: -237686.0 ( -114.99 by residue)
QMean score : 0.573

(partial model without unconserved sides chains):
PDB file : Tito_3GRU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GRU-query.scw
PDB file : Tito_Scwrl_3GRU.pdb: