Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKHDIEKVLISEEEIQKKVKELGAELTSEYQDTFP------LAIGVLKGALPFMADLIKHIDTYLEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIKADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYES
4RHX Chain:D ((21-200))
----DIKSVLLTAEQIQARIAELGEQIGNDYRELSATTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSS----------VRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVY--
General information:
TITO was launched using:
RESULT:
Template:
4RHX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147049 for 1266 contacts (-116.2/contact) +
2D Compatibility (PS) -17305 + (NN) -1597 + (LL) 532
1D Compatibility (HY) -21200 + (ID) 4050
Total energy: -190669.0 ( -150.61 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_4RHX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHX-query.scw
PDB file :
Tito_Scwrl_4RHX.pdb
: