Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
3F0F Chain:B ((24-179))
-FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR-
General information:
TITO was launched using:
RESULT:
Template:
3F0F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120106 for 1321 contacts (-90.9/contact) +
2D Compatibility (PS) -16890 + (NN) -10409 + (LL) 36
1D Compatibility (HY) -14400 + (ID) 4800
Total energy: -166569.0 ( -126.09 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_3F0F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0F-query.scw
PDB file :
Tito_Scwrl_3F0F.pdb
: