Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEMMIKKRIKQVKKGDQDAFADIVDIYKDKIYQLCYRMLGNVHEAEDIAQEAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYSQIVADGVLPEDAVVSLELSNTIQQKILKLPDKYRTVIVLKYIDELSLIEIGEILNIPVGTVKTRIHRGREALRKQLRDL
1H3L Chain:A ((28-102))
-----------STAERSARFERDALEFLDQMYSAALRMTRNPADAEDLVQETYAKAYASFHQFREGTNLKAWLYRILTNTFINSYR-----------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1H3L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50448 for 485 contacts (-104.0/contact) +
2D Compatibility (PS) -8063 + (NN) -1145 + (LL) 9616
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: -53590.0 ( -110.49 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_1H3L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H3L-query.scw
PDB file :
Tito_Scwrl_1H3L.pdb
: