Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLIEHYVALVKTGCAEYGQMNEMTLTEIADCLFCTERNAKLILHKLENSNWIIRESGAGRGRKSKIAFLRRPEELLLQTAKEYTMSGKLKKAKELLQQYQSAFPGLQNEYNMWLSEVFGFVTETGENGAKDVLRLFITPESVSSLDPCQIFLRSEGH-FVKQIFDTLFTFDSDMQEPKPHLVHGWEEVG-KKQWRFFLRKGVLFHNGQ------PLTSRDVAFTFQRFLELADNPYK-------------WLLHGVKQVLEKGPYCVELILDKPNALLPYALCDERLSILPAEQG-------------GGKNGTGPFQMNQQH-SGMLVLEANERYFKGRPYLDRVEFVFSEQAGE-MN---GFTIQ-E-----------KQTCPEQQTVFDERHVQYLSLNLKKKGPLQHRSFRKALRLLISSERLVREAGGHRRIPVTSFLHPSP---------FEWEGVSPSELLKKSGYE-GETIVLYTFS-----ETDHREDAEWIQNICAQHGIRLTLQFCDAADLRRPEIVQMADIIHDSATFYQDSEFGFLHLLLSEN-----SFLYQHLSEKLTQICSGMTERMFSMPDRCSRINILRDIDRQMIQELNAIPLYQNVLQVTSSKNVKGLVLDEEGWIDLYSVWLSK
5F1Q Chain:A ((29-536))-----------------------------------------------------------------------------------------------------------------------------------KTLVYCS-EGSPEGFNPQLFTSGTTYDASSVPIYNRLVEFKIGTTEIEPSLAERWEVSEDGKTYTFYLRKGVKWQDNKDFKPTRDFNADDVIYSFMRQKDDK-NPYHKVSGGSYEYFQGMGMGDLITNVVKVDDNTVRFELTRPESPFLADLAMDFASILSAEYADNMLKAGTPEKVDLNPIGTGPFQLQQYQKDSRILYKAFPGFWGTKPKIDRLVFSITPDASVRYAKLQKNECQIMPYPNPADIARMKEDKTINLMEQPGLNVGYLSFNIEK-KPLDNLKVRQALTMAVNKDAIIDAVYQGAGQAAKNLIPPTMWGYNDDVKDYAYDPAKAKELLKEAGLPDGFSIDLWAMPVQRPYNPNARRMAEMIQSDWAKIGVKAKIVTYEWGEYLKRAKDGEHETVMMGWTGDNGDPDNFFATLFSCDAAKQGSNYSKWC----YKPFEDLIQPARAEADHDKRVALYKQAQVVMNEQAPALIIAHSTVYEPVRKEVKGYVVDPLGKHHFDNVSLDA


General information:
TITO was launched using:
RESULT:

Template: 5F1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2441 -176987 -72.51 -405.00
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -72.51
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.388

(partial model without unconserved sides chains):
PDB file : Tito_5F1Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5F1Q-query.scw
PDB file : Tito_Scwrl_5F1Q.pdb: