Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIYGVYMDRPLSAGEEDRMMAAVSAE---KREKCRRFYHKEDAHRT----LIGDMLIRTAAAKAYGLDP------AGISFGVQEYGKPY----------IPALPDMHFNISHSGRWIVCAVDSKPIGIDIEKMKPGTIDIAKRFFSPTEY----------------SDLQAKHPDQQTDYF--YHLWSMK-----ESFIKQAGKGLSLP---LDSFSVRLKDDGHVS----IELPDGHEPCFIRTYDADEEYKLAVCAAHPDFCDGIEMKTYEELL--------
4KXR Chain:C ((8-298))-------TDITVNVDGFWMLQALLDIRHVAPELRCRPYVHPGMAVMREQGIVVNDAVNEQVAARMKVLAAPDLEVVALLSRGKLLYGVIDDENQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGNDITVDDVTVSD-SASIAALVMDGLESIHHADPAAINAVNVPMEEMLEATKSWQESGFNVFSGGDLRRMGISAATVAALGQALSDPAAEVAVYARQYRDDAKGPSASVLSLKDGSGG-RIALYQQAREAWLAICPATPQLVQVGVKTVLDTLPYGEWKTHS


General information:
TITO was launched using:
RESULT:

Template: 4KXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 875 -7317 -8.36 -34.03
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain C : 0.62

3D Compatibility (PKB) : -8.36
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.129

(partial model without unconserved sides chains):
PDB file : Tito_4KXR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KXR-query.scw
PDB file : Tito_Scwrl_4KXR.pdb: