Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSLLAIYPGSIVSEELCIREGCLCFFDESNQRYISIPKTEISEKEVLVLQSFLTPADEGNQLSMKSPEENKWFSFLFSRGELPAYIKKRTRFVHFHLFGKIERTSFTEAVRHFWPVSFVIVWIHEDRGVIV---EQESEAAAEKDELESLAKVLESDFYFSVRFYAGRFYEPDECLRKHYAREQAYFLFAEKRLPQVQ-SVTFEMIFPFLLLETEKEKLETLLSEEAELLFGSESELRKTIKLFIENNSNV------TLTAKKLHLHRNSLQYRIDKFIERSGIDIKSYKGALLAYFICLQNESSE
1EFV Chain:B ((4-255))LRVLVAVK--RVIDYAVKIR-----VKPDRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKL-----------------------------VKEVIAVSCGP---AQCQETIRTALAMGA-------DRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKV-DLVLLGKQAIDDD-------CNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLTS-KLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGRI


General information:
TITO was launched using:
RESULT:

Template: 1EFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1248 -40650 -32.57 -167.97
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain B : 0.63

3D Compatibility (PKB) : -32.57
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.295

(partial model without unconserved sides chains):
PDB file : Tito_1EFV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EFV-query.scw
PDB file : Tito_Scwrl_1EFV.pdb: