Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEHQSLPAPEASTEVRVAIVGV-GNCASSLVQGVEYYYNADDTSTVPGL-----------MHVRFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENN-----TIKIADVAPTNVIVQRGP-------------------TLDGIGKYYADTIELSDAEPVDVVQALKEAKVDVLVSYLPVGSEE-ADKFYAQCAIDAGVAFVNALPVFIASDPVWAKKFTDARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGG---PVIPASAYLMKSPPEQLPDDIARAQLEEFIIG |
| 1GR0 Chain:A ((14-367)) | -------------TEVRVAIVG-VGNCASSLVQGVEYYY-----------NADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVA-----PTNVIVQRGPTLDGIGKYYADTIELSDAE-PVDVVQALKEAK------VDVLVSYLPV------------GSE-EADKFYAQCAIDAGVAFVNALPVFIASDPVWAKKFTDARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNMLED--------------------------VHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRG---IGGPVIPASAYLMKSPPEQLPDDIARAQLEEFIIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GR0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145614 for 2478 contacts (-58.8/contact) +
2D Compatibility (PS) -31121 + (NN) -8546 + (LL) 5096
1D Compatibility (HY) -39200 + (ID) 13200
Total energy: -232585.0 ( -93.86 by residue)
QMean score : 0.484
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